Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smchd1Q6P5D8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smchd1Q6P5D8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smchd1Q6P5D8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smchd1Q6P5D8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Phf7-203ENSMUST00000226565 1971 ntBASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smchd1Q6P5D8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gm29518-201ENSMUST00000190858 372 ntBASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smchd1Q6P5D8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smchd1Q6P5D8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.89■□□□□ 0.62
Smchd1Q6P5D8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smchd1Q6P5D8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.89■□□□□ 0.61
Smchd1Q6P5D8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smchd1Q6P5D8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Mir770-201ENSMUST00000103252 94 ntBASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smchd1Q6P5D8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms