Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga7Q6DD96 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga7Q6DD96 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhga7Q6DD96 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhga7Q6DD96 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga7Q6DD96 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.69■□□□□ 0.26
Pcdhga7Q6DD96 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Gm6576-201ENSMUST00000169678 883 ntBASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga7Q6DD96 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga7Q6DD96 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms