Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.29■□□□□ 0.2
AtmQ62388 Gm6376-201ENSMUST00000209407 580 ntBASIC16.29■□□□□ 0.2
AtmQ62388 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.29■□□□□ 0.2
AtmQ62388 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AtmQ62388 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.28■□□□□ 0.2
AtmQ62388 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.28■□□□□ 0.2
AtmQ62388 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AtmQ62388 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
AtmQ62388 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.27■□□□□ 0.2
AtmQ62388 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.27■□□□□ 0.2
AtmQ62388 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AtmQ62388 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
AtmQ62388 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.27■□□□□ 0.19
AtmQ62388 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AtmQ62388 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AtmQ62388 Gm15372-201ENSMUST00000120729 834 ntBASIC16.27■□□□□ 0.19
AtmQ62388 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.27■□□□□ 0.19
AtmQ62388 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
AtmQ62388 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
AtmQ62388 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AtmQ62388 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.26■□□□□ 0.19
AtmQ62388 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.26■□□□□ 0.19
AtmQ62388 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.26■□□□□ 0.19
AtmQ62388 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
AtmQ62388 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AtmQ62388 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.25■□□□□ 0.19
AtmQ62388 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AtmQ62388 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AtmQ62388 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Gm2213-201ENSMUST00000197485 688 ntBASIC16.25■□□□□ 0.19
AtmQ62388 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
AtmQ62388 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Idnk-204ENSMUST00000226010 1898 ntBASIC16.25■□□□□ 0.19
AtmQ62388 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.25■□□□□ 0.19
AtmQ62388 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
AtmQ62388 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
AtmQ62388 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AtmQ62388 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
AtmQ62388 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.24■□□□□ 0.19
AtmQ62388 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.24■□□□□ 0.19
AtmQ62388 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms