Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Six1Q62231 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.66■□□□□ 0.42
Six1Q62231 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Six1Q62231 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Six1Q62231 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.65■□□□□ 0.42
Six1Q62231 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Gm24841-201ENSMUST00000158676 357 ntBASIC17.65■□□□□ 0.42
Six1Q62231 Gm10517-202ENSMUST00000192970 758 ntBASIC17.65■□□□□ 0.42
Six1Q62231 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.65■□□□□ 0.42
Six1Q62231 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six1Q62231 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.65■□□□□ 0.42
Six1Q62231 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Six1Q62231 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six1Q62231 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six1Q62231 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Six1Q62231 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six1Q62231 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six1Q62231 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six1Q62231 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Six1Q62231 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.64■□□□□ 0.41
Six1Q62231 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Six1Q62231 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Six1Q62231 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Six1Q62231 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.64■□□□□ 0.41
Six1Q62231 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six1Q62231 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.63■□□□□ 0.41
Six1Q62231 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.63■□□□□ 0.41
Six1Q62231 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.63■□□□□ 0.41
Six1Q62231 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.63■□□□□ 0.41
Six1Q62231 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Six1Q62231 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six1Q62231 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six1Q62231 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Six1Q62231 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.62■□□□□ 0.41
Six1Q62231 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Six1Q62231 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six1Q62231 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms