Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Zic4Q61467 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Zic4Q61467 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
Zic4Q61467 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Zic4Q61467 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Zic4Q61467 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Zic4Q61467 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Zic4Q61467 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Zic4Q61467 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.97□□□□□ -0.17
Zic4Q61467 Gm45417-201ENSMUST00000209533 758 ntBASIC13.97□□□□□ -0.17
Zic4Q61467 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.97□□□□□ -0.17
Zic4Q61467 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.97□□□□□ -0.17
Zic4Q61467 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Zic4Q61467 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Zic4Q61467 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Zic4Q61467 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Zic4Q61467 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Zic4Q61467 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Zic4Q61467 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Zic4Q61467 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Zic4Q61467 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Zic4Q61467 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Zic4Q61467 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Mir2861-201ENSMUST00000175539 82 ntBASIC13.95□□□□□ -0.18
Zic4Q61467 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Zic4Q61467 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC13.95□□□□□ -0.18
Zic4Q61467 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Zic4Q61467 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Zic4Q61467 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.95□□□□□ -0.18
Zic4Q61467 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Zic4Q61467 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.94□□□□□ -0.18
Zic4Q61467 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.94□□□□□ -0.18
Zic4Q61467 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Zic4Q61467 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Zic4Q61467 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Zic4Q61467 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Zic4Q61467 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Zic4Q61467 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Zic4Q61467 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms