Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ClpbQ60649 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.52■□□□□ 0.24
ClpbQ60649 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ClpbQ60649 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Gm10418-201ENSMUST00000100943 576 ntBASIC16.52■□□□□ 0.24
ClpbQ60649 Gm37055-201ENSMUST00000191866 133 ntBASIC16.52■□□□□ 0.24
ClpbQ60649 Gm29791-202ENSMUST00000207888 369 ntBASIC16.52■□□□□ 0.24
ClpbQ60649 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.52■□□□□ 0.24
ClpbQ60649 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClpbQ60649 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ClpbQ60649 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
ClpbQ60649 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.52■□□□□ 0.23
ClpbQ60649 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ClpbQ60649 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ClpbQ60649 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ClpbQ60649 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.52■□□□□ 0.23
ClpbQ60649 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ClpbQ60649 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClpbQ60649 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ClpbQ60649 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ClpbQ60649 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ClpbQ60649 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.5■□□□□ 0.23
ClpbQ60649 Mir5122-201ENSMUST00000175004 89 ntBASIC16.5■□□□□ 0.23
ClpbQ60649 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ClpbQ60649 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.5■□□□□ 0.23
ClpbQ60649 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ClpbQ60649 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ClpbQ60649 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.5■□□□□ 0.23
ClpbQ60649 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClpbQ60649 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ClpbQ60649 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpbQ60649 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.49■□□□□ 0.23
ClpbQ60649 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpbQ60649 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.49■□□□□ 0.23
ClpbQ60649 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ClpbQ60649 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.49■□□□□ 0.23
ClpbQ60649 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpbQ60649 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Mir8112-201ENSMUST00000184382 131 ntBASIC16.48■□□□□ 0.23
ClpbQ60649 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.48■□□□□ 0.23
ClpbQ60649 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ClpbQ60649 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.48■□□□□ 0.23
ClpbQ60649 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpbQ60649 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ClpbQ60649 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.47■□□□□ 0.23
ClpbQ60649 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.47■□□□□ 0.23
ClpbQ60649 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpbQ60649 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms