Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm11539-201ENSMUST00000119837 557 ntBASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm13436-201ENSMUST00000120418 567 ntBASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm43799-201ENSMUST00000201845 579 ntBASIC16.45■□□□□ 0.22
Xrcc1Q60596 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Gm13559-201ENSMUST00000120476 863 ntBASIC16.44■□□□□ 0.22
Xrcc1Q60596 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Gm27463-201ENSMUST00000183569 57 ntBASIC16.44■□□□□ 0.22
Xrcc1Q60596 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.44■□□□□ 0.22
Xrcc1Q60596 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrcc1Q60596 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrcc1Q60596 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.42■□□□□ 0.22
Xrcc1Q60596 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Xrcc1Q60596 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrcc1Q60596 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.42■□□□□ 0.22
Xrcc1Q60596 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Gm17661-201ENSMUST00000170317 270 ntBASIC16.41■□□□□ 0.22
Xrcc1Q60596 Gm9731-201ENSMUST00000209480 747 ntBASIC16.41■□□□□ 0.22
Xrcc1Q60596 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.41■□□□□ 0.22
Xrcc1Q60596 Gm7791-201ENSMUST00000219066 539 ntBASIC16.41■□□□□ 0.22
Xrcc1Q60596 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrcc1Q60596 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Xrcc1Q60596 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms