Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Gm42545-201ENSMUST00000202755 922 ntBASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ctc1Q5SUQ9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ctc1Q5SUQ9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Ctc1Q5SUQ9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Gm21362-201ENSMUST00000194272 928 ntBASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ctc1Q5SUQ9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Gm37292-201ENSMUST00000192062 758 ntBASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ctc1Q5SUQ9 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ctc1Q5SUQ9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Gm7889-201ENSMUST00000185591 958 ntBASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ctc1Q5SUQ9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ctc1Q5SUQ9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Ctc1Q5SUQ9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms