Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Gm45058-201ENSMUST00000205810 766 ntBASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps54Q5SPW0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Vps54Q5SPW0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Mir5130-201ENSMUST00000175160 84 ntBASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps54Q5SPW0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps54Q5SPW0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Vps54Q5SPW0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps54Q5SPW0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps54Q5SPW0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps54Q5SPW0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Gm16061-201ENSMUST00000122167 857 ntBASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Vps54Q5SPW0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms