Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc88aQ5SNZ0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc88aQ5SNZ0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm18733-201ENSMUST00000173950 856 ntBASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm28659-201ENSMUST00000188013 759 ntBASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc88aQ5SNZ0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm11355-201ENSMUST00000121120 306 ntBASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.75■□□□□ 0.75
Ccdc88aQ5SNZ0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc88aQ5SNZ0 Mir770-201ENSMUST00000103252 94 ntBASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc88aQ5SNZ0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm27459-201ENSMUST00000184860 107 ntBASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc88aQ5SNZ0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms