Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.51■□□□□ 0.39
Rnf43Q5NCP0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf43Q5NCP0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Gm37722-201ENSMUST00000193757 208 ntBASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf43Q5NCP0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Gm6623-201ENSMUST00000173570 544 ntBASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Gm45328-201ENSMUST00000210942 917 ntBASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Gm18115-201ENSMUST00000221209 621 ntBASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf43Q5NCP0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Mir770-201ENSMUST00000103252 94 ntBASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Rnf43Q5NCP0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf43Q5NCP0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms