Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.1■□□□□ 0.33
Vps13aQ5H8C4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Gm6296-201ENSMUST00000222599 943 ntBASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps13aQ5H8C4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Vps13aQ5H8C4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Chchd1-203ENSMUST00000224633 557 ntBASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Vps13aQ5H8C4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Vps13aQ5H8C4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Grk6-207ENSMUST00000225925 2769 ntBASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps13aQ5H8C4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vps13aQ5H8C4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Gm9727-201ENSMUST00000161387 555 ntBASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vps13aQ5H8C4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms