Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf20Q5DTM8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.48■□□□□ 0.87
Rnf20Q5DTM8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rnf20Q5DTM8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rnf20Q5DTM8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.45■□□□□ 0.86
Rnf20Q5DTM8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf20Q5DTM8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Mir1199-201ENSMUST00000117015 119 ntBASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Gm37025-201ENSMUST00000195159 829 ntBASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf20Q5DTM8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms