Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3hdm4Q4VBF2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Gm7889-201ENSMUST00000185591 958 ntBASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
R3hdm4Q4VBF2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
R3hdm4Q4VBF2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
R3hdm4Q4VBF2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
R3hdm4Q4VBF2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3hdm4Q4VBF2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
R3hdm4Q4VBF2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
R3hdm4Q4VBF2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
R3hdm4Q4VBF2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
R3hdm4Q4VBF2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms