Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm9013-201ENSMUST00000132939 882 ntBASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm26039-201ENSMUST00000158152 144 ntBASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Gm5587-201ENSMUST00000206270 674 ntBASIC20.08■□□□□ 0.81
Prpf38aQ4FK66 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38aQ4FK66 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38aQ4FK66 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38aQ4FK66 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Prpf38aQ4FK66 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Prpf38aQ4FK66 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gm11355-201ENSMUST00000121120 306 ntBASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Prpf38aQ4FK66 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.05■□□□□ 0.8
Prpf38aQ4FK66 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Prpf38aQ4FK66 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf38aQ4FK66 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms