Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ckap2Q3V1H1 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ckap2Q3V1H1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Gm27000-201ENSMUST00000182943 842 ntBASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ckap2Q3V1H1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ckap2Q3V1H1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ckap2Q3V1H1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Gm13559-201ENSMUST00000120476 863 ntBASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.7■□□□□ 0.74
Ckap2Q3V1H1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms