Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Arhgef40Q3UPH7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Arhgef40Q3UPH7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Gm18421-201ENSMUST00000204122 625 ntBASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Arhgef40Q3UPH7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Arhgef40Q3UPH7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Gm5864-201ENSMUST00000202263 970 ntBASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Arhgef40Q3UPH7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Gm43073-201ENSMUST00000198200 1189 ntBASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC25.28■■□□□ 1.64
Arhgef40Q3UPH7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC25.27■■□□□ 1.64
Arhgef40Q3UPH7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Gm37935-201ENSMUST00000192012 982 ntBASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Arhgef40Q3UPH7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC25.25■■□□□ 1.63
Arhgef40Q3UPH7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms