Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lins1Q3U1D0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Gm14859-201ENSMUST00000117752 357 ntBASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lins1Q3U1D0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Lins1Q3U1D0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lins1Q3U1D0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Gm7213-201ENSMUST00000215977 950 ntBASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Lins1Q3U1D0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Gm9103-201ENSMUST00000119371 405 ntBASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Gm9013-201ENSMUST00000132939 882 ntBASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lins1Q3U1D0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lins1Q3U1D0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Gm7284-201ENSMUST00000131667 944 ntBASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lins1Q3U1D0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lins1Q3U1D0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Gm27704-201ENSMUST00000185094 107 ntBASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lins1Q3U1D0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms