Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrrc28Q3TX51 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 AA414768-201ENSMUST00000121924 1257 ntBASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrrc28Q3TX51 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Gm21362-201ENSMUST00000194272 928 ntBASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Lrrc28Q3TX51 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Gm6345-202ENSMUST00000180900 204 ntBASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrrc28Q3TX51 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Mir1668-201ENSMUST00000184114 107 ntBASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrrc28Q3TX51 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lrrc28Q3TX51 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms