Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Khdc4Q3TCX3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Mir2861-201ENSMUST00000175539 82 ntBASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Khdc4Q3TCX3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Gm10517-202ENSMUST00000192970 758 ntBASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Khdc4Q3TCX3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Khdc4Q3TCX3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Gm6659-201ENSMUST00000174752 547 ntBASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Gm18959-201ENSMUST00000208954 655 ntBASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Khdc4Q3TCX3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Khdc4Q3TCX3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Khdc4Q3TCX3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Khdc4Q3TCX3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Khdc4Q3TCX3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 340.2 ms