Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Gm15375-201ENSMUST00000119510 849 ntBASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nhej1Q3KNJ2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nhej1Q3KNJ2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nhej1Q3KNJ2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nhej1Q3KNJ2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gm13216-201ENSMUST00000117145 591 ntBASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gm5408-201ENSMUST00000197998 747 ntBASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nhej1Q3KNJ2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Gm12933-201ENSMUST00000120203 872 ntBASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Nhej1Q3KNJ2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms