Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm12085-201ENSMUST00000119263 940 ntBASIC16.25■□□□□ 0.19
Nkx3-2P97503 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.25■□□□□ 0.19
Nkx3-2P97503 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx3-2P97503 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Gm24841-201ENSMUST00000158676 357 ntBASIC16.24■□□□□ 0.19
Nkx3-2P97503 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx3-2P97503 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx3-2P97503 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nkx3-2P97503 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.22■□□□□ 0.19
Nkx3-2P97503 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.22■□□□□ 0.19
Nkx3-2P97503 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx3-2P97503 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Gm45058-201ENSMUST00000205810 766 ntBASIC16.21■□□□□ 0.19
Nkx3-2P97503 Gm18959-201ENSMUST00000208954 655 ntBASIC16.21■□□□□ 0.19
Nkx3-2P97503 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx3-2P97503 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Nkx3-2P97503 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Nkx3-2P97503 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms