Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.3□□□□□ -0.12
Pdlim4P70271 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.3□□□□□ -0.12
Pdlim4P70271 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pdlim4P70271 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim4P70271 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm715-201ENSMUST00000117865 831 ntBASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm4974-201ENSMUST00000209974 875 ntBASIC14.29□□□□□ -0.12
Pdlim4P70271 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim4P70271 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim4P70271 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.29□□□□□ -0.12
Pdlim4P70271 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Pdlim4P70271 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.28□□□□□ -0.12
Pdlim4P70271 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pdlim4P70271 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pdlim4P70271 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim4P70271 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pdlim4P70271 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.27□□□□□ -0.12
Pdlim4P70271 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim4P70271 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim4P70271 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.27□□□□□ -0.13
Pdlim4P70271 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim4P70271 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim4P70271 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.27□□□□□ -0.13
Pdlim4P70271 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim4P70271 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim4P70271 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pdlim4P70271 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms