Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ybx1P62960 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ybx1P62960 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Ybx1P62960 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ybx1P62960 Mir770-201ENSMUST00000103252 94 ntBASIC17.61■□□□□ 0.41
Ybx1P62960 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.61■□□□□ 0.41
Ybx1P62960 Gm37722-201ENSMUST00000193757 208 ntBASIC17.61■□□□□ 0.41
Ybx1P62960 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.61■□□□□ 0.41
Ybx1P62960 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Ybx1P62960 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.61■□□□□ 0.41
Ybx1P62960 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ybx1P62960 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ybx1P62960 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Gm6623-201ENSMUST00000173570 544 ntBASIC17.6■□□□□ 0.41
Ybx1P62960 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.6■□□□□ 0.41
Ybx1P62960 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.6■□□□□ 0.41
Ybx1P62960 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.6■□□□□ 0.41
Ybx1P62960 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ybx1P62960 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.6■□□□□ 0.41
Ybx1P62960 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.6■□□□□ 0.41
Ybx1P62960 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.6■□□□□ 0.41
Ybx1P62960 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ybx1P62960 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ybx1P62960 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.59■□□□□ 0.41
Ybx1P62960 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ybx1P62960 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ybx1P62960 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.59■□□□□ 0.41
Ybx1P62960 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.59■□□□□ 0.41
Ybx1P62960 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ybx1P62960 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ybx1P62960 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.58■□□□□ 0.41
Ybx1P62960 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ybx1P62960 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.58■□□□□ 0.41
Ybx1P62960 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ybx1P62960 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.58■□□□□ 0.4
Ybx1P62960 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Mir3081-201ENSMUST00000175305 84 ntBASIC17.58■□□□□ 0.4
Ybx1P62960 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ybx1P62960 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ybx1P62960 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.57■□□□□ 0.4
Ybx1P62960 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms