Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a1P61620 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a1P61620 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sec61a1P61620 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Dancr-204ENSMUST00000132389 2347 ntBASIC15.16■□□□□ 0.02
Sec61a1P61620 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.16■□□□□ 0.02
Sec61a1P61620 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Sec61a1P61620 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.16■□□□□ 0.02
Sec61a1P61620 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Sec61a1P61620 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Gm44549-201ENSMUST00000208351 577 ntBASIC15.16■□□□□ 0.02
Sec61a1P61620 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.16■□□□□ 0.02
Sec61a1P61620 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.16■□□□□ 0.02
Sec61a1P61620 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a1P61620 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.15■□□□□ 0.02
Sec61a1P61620 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Gm13168-201ENSMUST00000121771 632 ntBASIC15.15■□□□□ 0.02
Sec61a1P61620 Gm2559-201ENSMUST00000201323 363 ntBASIC15.15■□□□□ 0.02
Sec61a1P61620 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.15■□□□□ 0.02
Sec61a1P61620 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sec61a1P61620 Tgds-204ENSMUST00000228543 1594 ntBASIC15.15■□□□□ 0.02
Sec61a1P61620 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.14■□□□□ 0.01
Sec61a1P61620 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.14■□□□□ 0.01
Sec61a1P61620 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.14■□□□□ 0.01
Sec61a1P61620 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sec61a1P61620 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.13■□□□□ 0.01
Sec61a1P61620 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Gm22240-201ENSMUST00000175225 82 ntBASIC15.13■□□□□ 0.01
Sec61a1P61620 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.13■□□□□ 0.01
Sec61a1P61620 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sec61a1P61620 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sec61a1P61620 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sec61a1P61620 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sec61a1P61620 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.12■□□□□ 0.01
Sec61a1P61620 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms