Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.7■□□□□ 0.1
Cdh11P55288 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cdh11P55288 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.7■□□□□ 0.1
Cdh11P55288 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh11P55288 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh11P55288 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh11P55288 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.69■□□□□ 0.1
Cdh11P55288 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.69■□□□□ 0.1
Cdh11P55288 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh11P55288 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh11P55288 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cdh11P55288 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.69■□□□□ 0.1
Cdh11P55288 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh11P55288 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdh11P55288 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.68■□□□□ 0.1
Cdh11P55288 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdh11P55288 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.68■□□□□ 0.1
Cdh11P55288 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdh11P55288 Gm18666-201ENSMUST00000190039 958 ntBASIC15.68■□□□□ 0.1
Cdh11P55288 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh11P55288 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh11P55288 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdh11P55288 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdh11P55288 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh11P55288 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh11P55288 Haglr-201ENSMUST00000100000 2085 ntBASIC15.67■□□□□ 0.1
Cdh11P55288 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh11P55288 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdh11P55288 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdh11P55288 Gm11249-201ENSMUST00000117071 859 ntBASIC15.66■□□□□ 0.1
Cdh11P55288 Gm5643-201ENSMUST00000117081 966 ntBASIC15.66■□□□□ 0.1
Cdh11P55288 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdh11P55288 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.66■□□□□ 0.1
Cdh11P55288 Gm10252-201ENSMUST00000209541 832 ntBASIC15.66■□□□□ 0.1
Cdh11P55288 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.66■□□□□ 0.1
Cdh11P55288 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdh11P55288 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdh11P55288 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh11P55288 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdh11P55288 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh11P55288 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms