Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh6P54276 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Msh6P54276 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh6P54276 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Msh6P54276 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC21.84■■□□□ 1.09
Msh6P54276 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Msh6P54276 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Msh6P54276 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Msh6P54276 Gm8969-201ENSMUST00000199694 526 ntBASIC21.84■■□□□ 1.09
Msh6P54276 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh6P54276 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Msh6P54276 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Msh6P54276 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh6P54276 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Msh6P54276 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Msh6P54276 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Msh6P54276 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.83■■□□□ 1.08
Msh6P54276 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.83■■□□□ 1.08
Msh6P54276 Gm45328-201ENSMUST00000210942 917 ntBASIC21.83■■□□□ 1.08
Msh6P54276 Mzt1-203ENSMUST00000227948 952 ntBASIC21.83■■□□□ 1.08
Msh6P54276 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Msh6P54276 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Msh6P54276 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Olfr129-201ENSMUST00000122318 993 ntBASIC21.82■■□□□ 1.08
Msh6P54276 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Msh6P54276 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.82■■□□□ 1.08
Msh6P54276 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.82■■□□□ 1.08
Msh6P54276 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh6P54276 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.81■■□□□ 1.08
Msh6P54276 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Msh6P54276 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Msh6P54276 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.81■■□□□ 1.08
Msh6P54276 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.81■■□□□ 1.08
Msh6P54276 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh6P54276 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.8■■□□□ 1.08
Msh6P54276 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.8■■□□□ 1.08
Msh6P54276 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh6P54276 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh6P54276 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Msh6P54276 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.79■■□□□ 1.08
Msh6P54276 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Msh6P54276 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.79■■□□□ 1.08
Msh6P54276 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Msh6P54276 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Msh6P54276 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Msh6P54276 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh6P54276 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.79■■□□□ 1.08
Msh6P54276 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh6P54276 Birc2-201ENSMUST00000054878 378 ntBASIC21.79■■□□□ 1.08
Msh6P54276 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh6P54276 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh6P54276 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.79■■□□□ 1.08
Msh6P54276 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Msh6P54276 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Msh6P54276 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Msh6P54276 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.78■■□□□ 1.08
Msh6P54276 Gm27000-201ENSMUST00000182943 842 ntBASIC21.78■■□□□ 1.08
Msh6P54276 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.78■■□□□ 1.08
Msh6P54276 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
Msh6P54276 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Msh6P54276 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh6P54276 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.77■■□□□ 1.08
Msh6P54276 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh6P54276 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms