Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.64■□□□□ 0.57
SqleP52019 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Gm15467-201ENSMUST00000120582 445 ntBASIC18.64■□□□□ 0.57
SqleP52019 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
SqleP52019 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SqleP52019 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.64■□□□□ 0.57
SqleP52019 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SqleP52019 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SqleP52019 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SqleP52019 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SqleP52019 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.63■□□□□ 0.57
SqleP52019 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.63■□□□□ 0.57
SqleP52019 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SqleP52019 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SqleP52019 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
SqleP52019 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SqleP52019 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SqleP52019 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SqleP52019 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.62■□□□□ 0.57
SqleP52019 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SqleP52019 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SqleP52019 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.62■□□□□ 0.57
SqleP52019 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
SqleP52019 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.62■□□□□ 0.57
SqleP52019 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SqleP52019 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SqleP52019 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SqleP52019 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.61■□□□□ 0.57
SqleP52019 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.61■□□□□ 0.57
SqleP52019 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.61■□□□□ 0.57
SqleP52019 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
SqleP52019 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.61■□□□□ 0.57
SqleP52019 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SqleP52019 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SqleP52019 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SqleP52019 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
SqleP52019 Gm13312-201ENSMUST00000119631 718 ntBASIC18.6■□□□□ 0.57
SqleP52019 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.6■□□□□ 0.57
SqleP52019 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.6■□□□□ 0.57
SqleP52019 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SqleP52019 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
SqleP52019 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.6■□□□□ 0.57
SqleP52019 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.6■□□□□ 0.57
SqleP52019 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SqleP52019 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SqleP52019 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SqleP52019 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SqleP52019 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SqleP52019 Gm23935-201ENSMUST00000102303 57 ntBASIC18.59■□□□□ 0.57
SqleP52019 Gm24270-201ENSMUST00000102326 57 ntBASIC18.59■□□□□ 0.57
SqleP52019 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms