Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lhx3P50481 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lhx3P50481 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.45■□□□□ 0.38
Lhx3P50481 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Gm18958-201ENSMUST00000174258 762 ntBASIC17.45■□□□□ 0.38
Lhx3P50481 Gm27000-201ENSMUST00000182943 842 ntBASIC17.45■□□□□ 0.38
Lhx3P50481 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lhx3P50481 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lhx3P50481 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lhx3P50481 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lhx3P50481 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.44■□□□□ 0.38
Lhx3P50481 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lhx3P50481 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.44■□□□□ 0.38
Lhx3P50481 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lhx3P50481 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Lhx3P50481 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lhx3P50481 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Lhx3P50481 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lhx3P50481 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Lhx3P50481 Gm13474-201ENSMUST00000122466 815 ntBASIC17.43■□□□□ 0.38
Lhx3P50481 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lhx3P50481 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lhx3P50481 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.43■□□□□ 0.38
Lhx3P50481 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lhx3P50481 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.42■□□□□ 0.38
Lhx3P50481 Gm18032-201ENSMUST00000222541 538 ntBASIC17.42■□□□□ 0.38
Lhx3P50481 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lhx3P50481 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.42■□□□□ 0.38
Lhx3P50481 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lhx3P50481 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lhx3P50481 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.41■□□□□ 0.38
Lhx3P50481 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Lhx3P50481 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.41■□□□□ 0.38
Lhx3P50481 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.41■□□□□ 0.38
Lhx3P50481 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.41■□□□□ 0.38
Lhx3P50481 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lhx3P50481 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lhx3P50481 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.4■□□□□ 0.38
Lhx3P50481 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lhx3P50481 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms