Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Gm6576-201ENSMUST00000169678 883 ntBASIC17.48■□□□□ 0.39
Vps4bP46467 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.48■□□□□ 0.39
Vps4bP46467 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps4bP46467 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps4bP46467 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps4bP46467 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vps4bP46467 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps4bP46467 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vps4bP46467 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Vps4bP46467 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps4bP46467 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vps4bP46467 Gm11249-201ENSMUST00000117071 859 ntBASIC17.47■□□□□ 0.39
Vps4bP46467 Gm13158-201ENSMUST00000122007 736 ntBASIC17.47■□□□□ 0.39
Vps4bP46467 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vps4bP46467 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps4bP46467 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.46■□□□□ 0.39
Vps4bP46467 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Gm12527-201ENSMUST00000117967 564 ntBASIC17.46■□□□□ 0.39
Vps4bP46467 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vps4bP46467 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps4bP46467 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Vps4bP46467 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps4bP46467 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps4bP46467 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Vps4bP46467 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vps4bP46467 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
Vps4bP46467 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
Vps4bP46467 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps4bP46467 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps4bP46467 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.45■□□□□ 0.38
Vps4bP46467 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Vps4bP46467 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps4bP46467 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.45■□□□□ 0.38
Vps4bP46467 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps4bP46467 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps4bP46467 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps4bP46467 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vps4bP46467 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps4bP46467 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.44■□□□□ 0.38
Vps4bP46467 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps4bP46467 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps4bP46467 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.43■□□□□ 0.38
Vps4bP46467 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps4bP46467 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms