Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx2-6P43688 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-6P43688 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-6P43688 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-6P43688 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-6P43688 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx2-6P43688 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx2-6P43688 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.25■□□□□ 0.19
Nkx2-6P43688 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-6P43688 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.24■□□□□ 0.19
Nkx2-6P43688 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.24■□□□□ 0.19
Nkx2-6P43688 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-6P43688 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.23■□□□□ 0.19
Nkx2-6P43688 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-6P43688 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Nkx2-6P43688 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-6P43688 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms