Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Gm2399-201ENSMUST00000104944 225 ntBASIC14.22□□□□□ -0.13
Hist1h1aP43275 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hist1h1aP43275 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Gm18284-201ENSMUST00000172604 624 ntBASIC14.21□□□□□ -0.13
Hist1h1aP43275 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.21□□□□□ -0.13
Hist1h1aP43275 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hist1h1aP43275 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hist1h1aP43275 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hist1h1aP43275 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hist1h1aP43275 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.21□□□□□ -0.14
Hist1h1aP43275 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hist1h1aP43275 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.2□□□□□ -0.14
Hist1h1aP43275 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Gm26571-201ENSMUST00000181399 666 ntBASIC14.2□□□□□ -0.14
Hist1h1aP43275 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hist1h1aP43275 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hist1h1aP43275 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.2□□□□□ -0.14
Hist1h1aP43275 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Gm10849-201ENSMUST00000100397 618 ntBASIC14.19□□□□□ -0.14
Hist1h1aP43275 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Gm38285-201ENSMUST00000192928 922 ntBASIC14.19□□□□□ -0.14
Hist1h1aP43275 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.19□□□□□ -0.14
Hist1h1aP43275 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hist1h1aP43275 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hist1h1aP43275 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms