Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdx2P43241 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cdx2P43241 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdx2P43241 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdx2P43241 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdx2P43241 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdx2P43241 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdx2P43241 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdx2P43241 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdx2P43241 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.33■□□□□ 0.2
Cdx2P43241 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.33■□□□□ 0.2
Cdx2P43241 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdx2P43241 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdx2P43241 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.33■□□□□ 0.2
Cdx2P43241 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdx2P43241 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Gm11336-201ENSMUST00000118168 334 ntBASIC16.32■□□□□ 0.2
Cdx2P43241 Gm27459-201ENSMUST00000184860 107 ntBASIC16.32■□□□□ 0.2
Cdx2P43241 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.32■□□□□ 0.2
Cdx2P43241 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdx2P43241 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdx2P43241 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Cdx2P43241 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdx2P43241 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdx2P43241 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdx2P43241 Gm43514-201ENSMUST00000198852 424 ntBASIC16.31■□□□□ 0.2
Cdx2P43241 Gm6443-201ENSMUST00000203599 874 ntBASIC16.31■□□□□ 0.2
Cdx2P43241 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cdx2P43241 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdx2P43241 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cdx2P43241 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdx2P43241 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdx2P43241 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Gm12895-201ENSMUST00000122214 226 ntBASIC16.3■□□□□ 0.2
Cdx2P43241 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Mir8098-201ENSMUST00000184011 137 ntBASIC16.3■□□□□ 0.2
Cdx2P43241 Gm43347-201ENSMUST00000200226 580 ntBASIC16.3■□□□□ 0.2
Cdx2P43241 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdx2P43241 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdx2P43241 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cdx2P43241 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.29■□□□□ 0.2
Cdx2P43241 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cdx2P43241 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cdx2P43241 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cdx2P43241 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdx2P43241 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cdx2P43241 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdx2P43241 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cdx2P43241 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdx2P43241 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms