Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.5■□□□□ 0.23
Hoxb9P20615 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hoxb9P20615 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Timm23-208ENSMUST00000226683 750 ntBASIC16.49■□□□□ 0.23
Hoxb9P20615 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.49■□□□□ 0.23
Hoxb9P20615 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Gm10812-201ENSMUST00000099864 546 ntBASIC16.49■□□□□ 0.23
Hoxb9P20615 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.49■□□□□ 0.23
Hoxb9P20615 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hoxb9P20615 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxb9P20615 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxb9P20615 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxb9P20615 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.48■□□□□ 0.23
Hoxb9P20615 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hoxb9P20615 Gm7638-201ENSMUST00000121348 967 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Mir5122-201ENSMUST00000175004 89 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Gm21814-202ENSMUST00000203277 873 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Gm3375-201ENSMUST00000203929 796 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.48■□□□□ 0.23
Hoxb9P20615 Gm9731-201ENSMUST00000209480 747 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Odf3b-204ENSMUST00000227834 930 ntBASIC16.48■□□□□ 0.23
Hoxb9P20615 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxb9P20615 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxb9P20615 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxb9P20615 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Hoxb9P20615 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxb9P20615 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxb9P20615 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.47■□□□□ 0.23
Hoxb9P20615 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.47■□□□□ 0.23
Hoxb9P20615 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.47■□□□□ 0.23
Hoxb9P20615 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxb9P20615 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxb9P20615 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hoxb9P20615 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hoxb9P20615 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.46■□□□□ 0.23
Hoxb9P20615 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.46■□□□□ 0.23
Hoxb9P20615 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hoxb9P20615 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Hoxb9P20615 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxb9P20615 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hoxb9P20615 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxb9P20615 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxb9P20615 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxb9P20615 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxb9P20615 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hoxb9P20615 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxb9P20615 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.45■□□□□ 0.22
Hoxb9P20615 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.45■□□□□ 0.22
Hoxb9P20615 Il3ra-202ENSMUST00000223589 738 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms