Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa3P02831 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hoxa3P02831 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxa3P02831 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxa3P02831 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.43□□□□□ -0.1
Hoxa3P02831 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.43□□□□□ -0.1
Hoxa3P02831 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa3P02831 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa3P02831 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Hoxa3P02831 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxa3P02831 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hoxa3P02831 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.42□□□□□ -0.1
Hoxa3P02831 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.42□□□□□ -0.1
Hoxa3P02831 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Hoxa3P02831 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa3P02831 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.41□□□□□ -0.1
Hoxa3P02831 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.41□□□□□ -0.1
Hoxa3P02831 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Gm29791-202ENSMUST00000207888 369 ntBASIC14.41□□□□□ -0.1
Hoxa3P02831 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.41□□□□□ -0.1
Hoxa3P02831 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hoxa3P02831 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.4□□□□□ -0.1
Hoxa3P02831 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hoxa3P02831 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.4□□□□□ -0.1
Hoxa3P02831 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hoxa3P02831 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hoxa3P02831 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hoxa3P02831 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms