Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
P01734 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.74■□□□□ 0.59
P01734 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01734 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
P01734 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
P01734 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
P01734 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
P01734 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.73■□□□□ 0.59
P01734 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01734 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P01734 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P01734 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
P01734 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01734 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
P01734 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.71■□□□□ 0.59
P01734 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.71■□□□□ 0.59
P01734 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.71■□□□□ 0.59
P01734 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
P01734 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01734 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
P01734 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01734 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
P01734 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
P01734 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01734 Mir5130-201ENSMUST00000175160 84 ntBASIC18.7■□□□□ 0.58
P01734 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01734 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01734 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.69■□□□□ 0.58
P01734 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P01734 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.69■□□□□ 0.58
P01734 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.69■□□□□ 0.58
P01734 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P01734 Gm45058-201ENSMUST00000205810 766 ntBASIC18.69■□□□□ 0.58
P01734 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.69■□□□□ 0.58
P01734 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P01734 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P01734 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01734 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P01734 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.68■□□□□ 0.58
P01734 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01734 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms