Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P01643 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.67□□□□□ -0.22
P01643 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P01643 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.67□□□□□ -0.22
P01643 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P01643 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.67□□□□□ -0.22
P01643 Gm33142-201ENSMUST00000193913 867 ntBASIC13.67□□□□□ -0.22
P01643 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.67□□□□□ -0.22
P01643 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P01643 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
P01643 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P01643 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P01643 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.66□□□□□ -0.22
P01643 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.66□□□□□ -0.22
P01643 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P01643 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gm10819-201ENSMUST00000099988 561 ntBASIC13.66□□□□□ -0.22
P01643 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.66□□□□□ -0.22
P01643 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.66□□□□□ -0.22
P01643 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.66□□□□□ -0.22
P01643 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
P01643 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P01643 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
P01643 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
P01643 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
P01643 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
P01643 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
P01643 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.65□□□□□ -0.22
P01643 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.65□□□□□ -0.22
P01643 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
P01643 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.65□□□□□ -0.22
P01643 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
P01643 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
P01643 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
P01643 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.64□□□□□ -0.23
P01643 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
P01643 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
P01643 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
P01643 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.64□□□□□ -0.23
P01643 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.64□□□□□ -0.23
P01643 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.64□□□□□ -0.23
P01643 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.64□□□□□ -0.23
P01643 Gm18958-201ENSMUST00000174258 762 ntBASIC13.64□□□□□ -0.23
P01643 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.64□□□□□ -0.23
P01643 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
P01643 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
P01643 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
P01643 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
P01643 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
P01643 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms