Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CcnkO88874 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.32■□□□□ 0.04
CcnkO88874 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CcnkO88874 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CcnkO88874 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CcnkO88874 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CcnkO88874 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CcnkO88874 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CcnkO88874 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CcnkO88874 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.31■□□□□ 0.04
CcnkO88874 Gm7291-201ENSMUST00000199147 382 ntBASIC15.31■□□□□ 0.04
CcnkO88874 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.31■□□□□ 0.04
CcnkO88874 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CcnkO88874 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CcnkO88874 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Gm6211-202ENSMUST00000167849 925 ntBASIC15.3■□□□□ 0.04
CcnkO88874 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CcnkO88874 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CcnkO88874 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.3■□□□□ 0.04
CcnkO88874 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CcnkO88874 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
CcnkO88874 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CcnkO88874 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CcnkO88874 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.29■□□□□ 0.04
CcnkO88874 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.29■□□□□ 0.04
CcnkO88874 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CcnkO88874 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.28■□□□□ 0.04
CcnkO88874 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Tgds-204ENSMUST00000228543 1594 ntBASIC15.28■□□□□ 0.04
CcnkO88874 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CcnkO88874 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
CcnkO88874 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.28■□□□□ 0.04
CcnkO88874 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CcnkO88874 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CcnkO88874 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.28■□□□□ 0.04
CcnkO88874 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CcnkO88874 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CcnkO88874 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CcnkO88874 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms