Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Psmc3O88685 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Psmc3O88685 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.17■□□□□ 0.5
Psmc3O88685 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Psmc3O88685 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Psmc3O88685 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.16■□□□□ 0.5
Psmc3O88685 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Psmc3O88685 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Psmc3O88685 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Psmc3O88685 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Gm11355-201ENSMUST00000121120 306 ntBASIC18.15■□□□□ 0.5
Psmc3O88685 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.15■□□□□ 0.5
Psmc3O88685 Gm28033-201ENSMUST00000184224 96 ntBASIC18.15■□□□□ 0.5
Psmc3O88685 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Psmc3O88685 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Psmc3O88685 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Psmc3O88685 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Psmc3O88685 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.14■□□□□ 0.49
Psmc3O88685 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Psmc3O88685 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Psmc3O88685 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Psmc3O88685 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Psmc3O88685 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Psmc3O88685 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Psmc3O88685 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Psmc3O88685 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Psmc3O88685 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Psmc3O88685 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Psmc3O88685 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.12■□□□□ 0.49
Psmc3O88685 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Psmc3O88685 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.12■□□□□ 0.49
Psmc3O88685 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Gm7461-201ENSMUST00000058918 827 ntBASIC18.12■□□□□ 0.49
Psmc3O88685 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Psmc3O88685 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Psmc3O88685 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Psmc3O88685 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Psmc3O88685 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Psmc3O88685 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.11■□□□□ 0.49
Psmc3O88685 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms