Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cops6O88545 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cops6O88545 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cops6O88545 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cops6O88545 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.02■□□□□ 0.96
Cops6O88545 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.02■□□□□ 0.96
Cops6O88545 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.02■□□□□ 0.96
Cops6O88545 Gm17971-201ENSMUST00000190239 806 ntBASIC21.02■□□□□ 0.96
Cops6O88545 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.02■□□□□ 0.96
Cops6O88545 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.02■□□□□ 0.96
Cops6O88545 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cops6O88545 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cops6O88545 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cops6O88545 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cops6O88545 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cops6O88545 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cops6O88545 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cops6O88545 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cops6O88545 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.01■□□□□ 0.95
Cops6O88545 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cops6O88545 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Gm27742-201ENSMUST00000184667 60 ntBASIC21■□□□□ 0.95
Cops6O88545 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cops6O88545 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21■□□□□ 0.95
Cops6O88545 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cops6O88545 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Cops6O88545 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Cops6O88545 Gm18669-201ENSMUST00000216049 778 ntBASIC20.99■□□□□ 0.95
Cops6O88545 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.99■□□□□ 0.95
Cops6O88545 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cops6O88545 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.99■□□□□ 0.95
Cops6O88545 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.98■□□□□ 0.95
Cops6O88545 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cops6O88545 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.98■□□□□ 0.95
Cops6O88545 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cops6O88545 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.97■□□□□ 0.95
Cops6O88545 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.97■□□□□ 0.95
Cops6O88545 Gm45328-201ENSMUST00000210942 917 ntBASIC20.97■□□□□ 0.95
Cops6O88545 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cops6O88545 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Cops6O88545 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cops6O88545 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cops6O88545 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Mir3081-201ENSMUST00000175305 84 ntBASIC20.96■□□□□ 0.95
Cops6O88545 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cops6O88545 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.96■□□□□ 0.95
Cops6O88545 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.96■□□□□ 0.95
Cops6O88545 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cops6O88545 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cops6O88545 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cops6O88545 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cops6O88545 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms