Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Rdh5O55240 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rdh5O55240 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.31■□□□□ 0.2
Rdh5O55240 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.31■□□□□ 0.2
Rdh5O55240 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Rdh5O55240 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Rdh5O55240 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rdh5O55240 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.3■□□□□ 0.2
Rdh5O55240 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Rdh5O55240 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.3■□□□□ 0.2
Rdh5O55240 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.3■□□□□ 0.2
Rdh5O55240 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.3■□□□□ 0.2
Rdh5O55240 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rdh5O55240 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.3■□□□□ 0.2
Rdh5O55240 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.3■□□□□ 0.2
Rdh5O55240 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh5O55240 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.29■□□□□ 0.2
Rdh5O55240 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.29■□□□□ 0.2
Rdh5O55240 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rdh5O55240 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.29■□□□□ 0.2
Rdh5O55240 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rdh5O55240 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh5O55240 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.28■□□□□ 0.2
Rdh5O55240 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.28■□□□□ 0.2
Rdh5O55240 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.28■□□□□ 0.2
Rdh5O55240 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rdh5O55240 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rdh5O55240 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rdh5O55240 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh5O55240 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rdh5O55240 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.27■□□□□ 0.2
Rdh5O55240 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.27■□□□□ 0.2
Rdh5O55240 Gm24841-201ENSMUST00000158676 357 ntBASIC16.27■□□□□ 0.2
Rdh5O55240 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh5O55240 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.27■□□□□ 0.2
Rdh5O55240 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh5O55240 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh5O55240 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh5O55240 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rdh5O55240 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rdh5O55240 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rdh5O55240 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms