Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
Cldn5O54942 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cldn5O54942 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Gm13474-201ENSMUST00000122466 815 ntBASIC17.86■□□□□ 0.45
Cldn5O54942 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cldn5O54942 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cldn5O54942 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn5O54942 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cldn5O54942 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.85■□□□□ 0.45
Cldn5O54942 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.85■□□□□ 0.45
Cldn5O54942 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.85■□□□□ 0.45
Cldn5O54942 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cldn5O54942 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cldn5O54942 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn5O54942 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.84■□□□□ 0.45
Cldn5O54942 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cldn5O54942 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cldn5O54942 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Gm10013-201ENSMUST00000106074 672 ntBASIC17.84■□□□□ 0.45
Cldn5O54942 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.84■□□□□ 0.45
Cldn5O54942 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Gm18101-201ENSMUST00000215769 548 ntBASIC17.84■□□□□ 0.45
Cldn5O54942 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cldn5O54942 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn5O54942 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cldn5O54942 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn5O54942 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn5O54942 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Cldn5O54942 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn5O54942 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.83■□□□□ 0.44
Cldn5O54942 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.83■□□□□ 0.44
Cldn5O54942 Gm7213-201ENSMUST00000215977 950 ntBASIC17.83■□□□□ 0.44
Cldn5O54942 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Cldn5O54942 Gm10566-201ENSMUST00000086739 996 ntBASIC17.83■□□□□ 0.44
Cldn5O54942 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cldn5O54942 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Cldn5O54942 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn5O54942 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldn5O54942 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.82■□□□□ 0.44
Cldn5O54942 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.82■□□□□ 0.44
Cldn5O54942 Gm23634-201ENSMUST00000175071 91 ntBASIC17.82■□□□□ 0.44
Cldn5O54942 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cldn5O54942 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn5O54942 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn5O54942 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Cldn5O54942 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn5O54942 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cldn5O54942 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms