Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.61■□□□□ 0.41
Ercc2O08811 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ercc2O08811 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.6■□□□□ 0.41
Ercc2O08811 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ercc2O08811 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.6■□□□□ 0.41
Ercc2O08811 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ercc2O08811 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ercc2O08811 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ercc2O08811 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Ercc2O08811 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ercc2O08811 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.59■□□□□ 0.41
Ercc2O08811 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ercc2O08811 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Ercc2O08811 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ercc2O08811 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.59■□□□□ 0.41
Ercc2O08811 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.59■□□□□ 0.41
Ercc2O08811 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.58■□□□□ 0.41
Ercc2O08811 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc2O08811 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc2O08811 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc2O08811 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ercc2O08811 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc2O08811 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Ercc2O08811 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ercc2O08811 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.58■□□□□ 0.4
Ercc2O08811 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.58■□□□□ 0.4
Ercc2O08811 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc2O08811 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.58■□□□□ 0.4
Ercc2O08811 Gm9731-201ENSMUST00000209480 747 ntBASIC17.58■□□□□ 0.4
Ercc2O08811 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc2O08811 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.58■□□□□ 0.4
Ercc2O08811 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc2O08811 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ercc2O08811 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.58■□□□□ 0.4
Ercc2O08811 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Ercc2O08811 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ercc2O08811 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.57■□□□□ 0.4
Ercc2O08811 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.57■□□□□ 0.4
Ercc2O08811 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ercc2O08811 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.57■□□□□ 0.4
Ercc2O08811 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms