Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm19324-201ENSMUST00000213229 1169 ntBASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx1-1G3UXB3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Gm14701-201ENSMUST00000117156 348 ntBASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Gm19080-201ENSMUST00000196082 550 ntBASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx1-1G3UXB3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Nkx1-1G3UXB3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Gm15590-201ENSMUST00000078419 552 ntBASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx1-1G3UXB3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-1G3UXB3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-1G3UXB3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-1G3UXB3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx1-1G3UXB3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Gm14140-201ENSMUST00000119999 995 ntBASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Gm25131-201ENSMUST00000082653 151 ntBASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx1-1G3UXB3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx1-1G3UXB3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx1-1G3UXB3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms