Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC9.69□□□□□ -0.86
Herc1E9PZP8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC9.68□□□□□ -0.86
Herc1E9PZP8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm27622-201ENSMUST00000183779 60 ntBASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm27494-201ENSMUST00000184735 189 ntBASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc1E9PZP8 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Gm18062-201ENSMUST00000208020 547 ntBASIC9.67□□□□□ -0.86
Herc1E9PZP8 Gm18055-201ENSMUST00000208254 547 ntBASIC9.67□□□□□ -0.86
Herc1E9PZP8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.67□□□□□ -0.86
Herc1E9PZP8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.67□□□□□ -0.86
Herc1E9PZP8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.67□□□□□ -0.86
Herc1E9PZP8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Herc1E9PZP8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm13332-201ENSMUST00000120451 1398 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm11873-201ENSMUST00000117877 1304 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm13223-201ENSMUST00000118609 747 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm43474-201ENSMUST00000196415 774 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Gm38345-201ENSMUST00000192635 1748 ntBASIC9.66□□□□□ -0.86
Herc1E9PZP8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Herc1E9PZP8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm44492-201ENSMUST00000197012 141 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 AC149294.4-201ENSMUST00000227870 882 ntBASIC9.65□□□□□ -0.86
Herc1E9PZP8 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Herc1E9PZP8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms