Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Flg-201ENSMUST00000050758 1488 ntBASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm28043E0CXC2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28043E0CXC2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28043E0CXC2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Gm38285-201ENSMUST00000192928 922 ntBASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Zfp783-201ENSMUST00000095946 670 ntBASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28043E0CXC2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Dio3-201ENSMUST00000097228 1449 ntBASIC17.25■□□□□ 0.35
Gm28043E0CXC2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm28043E0CXC2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm28043E0CXC2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms