Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.37■□□□□ 0.05
Shank1D3YZU1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Fst-202ENSMUST00000223640 2612 ntBASIC15.36■□□□□ 0.05
Shank1D3YZU1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.36■□□□□ 0.05
Shank1D3YZU1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.36■□□□□ 0.05
Shank1D3YZU1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Gm29791-202ENSMUST00000207888 369 ntBASIC15.35■□□□□ 0.05
Shank1D3YZU1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Shank1D3YZU1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Gm13884-201ENSMUST00000118103 829 ntBASIC15.34■□□□□ 0.05
Shank1D3YZU1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Shank1D3YZU1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Shank1D3YZU1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Shank1D3YZU1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Shank1D3YZU1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.33■□□□□ 0.04
Shank1D3YZU1 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.33■□□□□ 0.04
Shank1D3YZU1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Shank1D3YZU1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms