Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfx8D3YU81 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.23■□□□□ 0.51
Rfx8D3YU81 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfx8D3YU81 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.23■□□□□ 0.51
Rfx8D3YU81 Odf3b-204ENSMUST00000227834 930 ntBASIC18.23■□□□□ 0.51
Rfx8D3YU81 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Rfx8D3YU81 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Gm24841-201ENSMUST00000158676 357 ntBASIC18.22■□□□□ 0.51
Rfx8D3YU81 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfx8D3YU81 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfx8D3YU81 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rfx8D3YU81 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rfx8D3YU81 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Mir5122-201ENSMUST00000175004 89 ntBASIC18.2■□□□□ 0.5
Rfx8D3YU81 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.2■□□□□ 0.5
Rfx8D3YU81 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfx8D3YU81 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfx8D3YU81 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms