Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chd3B1AR17 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chd3B1AR17 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chd3B1AR17 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chd3B1AR17 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.86■□□□□ 0.29
Chd3B1AR17 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.86■□□□□ 0.29
Chd3B1AR17 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd3B1AR17 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.85■□□□□ 0.29
Chd3B1AR17 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd3B1AR17 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Chd3B1AR17 Ank2-226ENSMUST00000189368 339 ntBASIC16.84■□□□□ 0.29
Chd3B1AR17 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd3B1AR17 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd3B1AR17 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd3B1AR17 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.84■□□□□ 0.29
Chd3B1AR17 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd3B1AR17 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd3B1AR17 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd3B1AR17 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.83■□□□□ 0.29
Chd3B1AR17 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd3B1AR17 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd3B1AR17 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Chd3B1AR17 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.83■□□□□ 0.29
Chd3B1AR17 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd3B1AR17 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
Chd3B1AR17 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd3B1AR17 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chd3B1AR17 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chd3B1AR17 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.81■□□□□ 0.28
Chd3B1AR17 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd3B1AR17 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chd3B1AR17 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chd3B1AR17 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.81■□□□□ 0.28
Chd3B1AR17 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd3B1AR17 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms