Protein–RNA interactions for Protein: A0A140T8L3

Rpl7a-ps5, Ribosomal protein L7A, pseudogene 5, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl7a-ps5A0A140T8L3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Gm22325-201ENSMUST00000158904 308 ntBASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rpl7a-ps5A0A140T8L3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rpl7a-ps5A0A140T8L3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rpl7a-ps5A0A140T8L3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rpl7a-ps5A0A140T8L3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms